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Snakemake Homepage Snakemake Documentation

Getting started

  • Installation

Workflow users

  • Deploy workflows
  • Register input data

Workflow developers

  • Update conda environment files
  • Pin/lock conda environments
  • Update Snakemake wrappers

Snakemake developers

  • Scaffold Snakemake Plugins

API Reference

  • The Snakedeploy API
  • Internal API
Snakedeploy documentation
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Overview: module code

All modules for which code is available

  • snakedeploy.client
  • snakedeploy.collect_files
  • snakedeploy.deploy
  • snakedeploy.logger
  • snakedeploy.providers

© 2020, Johannes Koester and Vanessa Sochat Built with Sphinx 7.3.7